This page provides access to raw data for DGIdb. While the application is open source, some of the data sources we import may have restrictions that prevent us from redistributing them. Please refer to the contact section under the Information menu if you would like to ask us detailed questions about data sources, etc.

Monthly TSVs

Interactions TSV

TSV download of all drug-gene interaction claims in DGIdb from all sources that were mapped to Entrez genes. For ease of use, we recommend working directly with the API or SQL database dump below.

Genes TSV

TSV download of all gene claims in DGIdb. For ease of use, we recommend working directly with the API or SQL database dump below.

Drugs TSV

TSV download of all drug claims in DGIdb. For ease of use, we recommend working directly with the API or SQL database dump below.

Categories TSV

TSV download of all genes in druggable categories in DGIdb from all sources that were mapped to Entrez genes. For ease of use, we recommend working directly with the API or SQL database dump below.

Date Interactions TSV Genes TSV Drugs TSV Categories TSV
2020-Sep interactions.tsv genes.tsv drugs.tsv categories.tsv

DrugBank Data

Note that DrugBank is not included in the interactions TSV file above. These data must be requested directly from DrugBank.

dGene data (04-16-2013)

TSV download of the latest version of the dGene database made available here at the request of the dGene creators. This data corresponds to the dGene publication and has not changed significantly since that publication.

DGIdb database dump

You may load the latest data dump into your local database instance by running the following command while in your local checkout of the DGIdb repository: rake dgidb:load_local . This will recreate your local database and import the latest data dump directly from the data repository. The data.sql file can then be found in the `data` directory of your local repository. Please see the Installation instructions for more details about creating a local instance of DGIdb.